All-Atom Contacts |
Clashscore, all atoms: | 43.4 | 6th percentile* (N=1784, all resolutions) |
Clashscore is the number of serious steric overlaps (> 0.4 Å) per 1000 atoms. | |||
Protein Geometry |
Poor rotamers | 3.28% | Goal: <1% |
Ramachandran outliers | 1.45% | Goal: <0.2% | |
Ramachandran favored | 94.20% | Goal: >98% | |
Cβ deviations >0.25Å | 0 | Goal: 0 | |
MolProbity score^ | 2.90 | 27th percentile* (N=27675, 0Å - 99Å) | |
Residues with bad bonds: | 0.00% | Goal: 0% | |
Residues with bad angles: | 0.00% | Goal: <0.1% |
Live sorting requires JavaScript enabled and Safari 2, Firefox 1.5, or IE 6
# | Res | High B | Clash > 0.4Å | Ramachandran | Rotamer | Cβ deviation | Bond lengths. | Bond angles. |
Avg: 135.61 | Clashscore: 43.4 | Outliers: 1 of 69 | Poor rotamers: 2 of 61 | Outliers: 0 of 66 | Outliers: 0 of 71 | Outliers: 0 of 71 | ||
1 | HIS | 68.34 | - | - | 73.6% (m80) chi angles: 289.9,77.3 | 0.059Å | - | - |
2 | THR | 242.98 | - | Favored (53.77%) Pre-proline / -120.3,149.1 | 14.4% (t) chi angles: 187 | 0.071Å | - | - |
3 | PRO | 183.56 | - | Favored (57.47%) Proline / -73.1,157.8 | 76.6% (Cg_exo) chi angles: 332.2 | 0.112Å | - | - |
4 | THR | 252.17 | - | Favored (30.46%) Pre-proline / -115.8,141.6 | 71.8% (p) chi angles: 63.4 | 0.108Å | - | - |
5 | PRO | 179.35 | - | Favored (47.99%) Proline / -75.0,159.7 | 71.5% (Cg_exo) chi angles: 332.5 | 0.08Å | - | - |
6 | THR | 230.4 | - | Favored (99.21%) Pre-proline / -68.5,138.9 | 53.1% (p) chi angles: 65.5 | 0.09Å | - | - |
7 | PRO | 156.99 | - | Favored (55.13%) Proline / -73.0,148.3 | 85.1% (Cg_exo) chi angles: 331.7 | 0.152Å | - | - |
8 | ILE | 111.13 | 0.553Å CG2 with 54 THR CB | Favored (63.39%) General case / -122.1,128.7 | 49.7% (mm) chi angles: 301.1,299.8 | 0.111Å | - | - |
9 | CYS | 54.2 | 0.438Å N with 57 CYS SG | Favored (32.33%) General case / -69.9,127.3 | 61% (m) chi angles: 303.9 | 0.132Å | - | - |
10 | LYS | 91.98 | - | Favored (56.41%) General case / -117.3,121.0 | 61% (mttm) chi angles: 288.8,168.9,179.2,304.4 | 0.07Å | - | - |
11 | SER | 47.94 | - | Favored (47.15%) General case / -139.5,149.9 | 51.6% (m) chi angles: 300.1 | 0.121Å | - | - |
12 | ARG | 179.74 | - | Favored (46.19%) General case / -72.1,144.0 | 19.9% (ttp180) chi angles: 180.1,198.7,74.5,155.5 | 0.105Å | - | - |
13 | SER | 71.14 | 0.422Å CB with 53 CYS SG | Favored (21.97%) General case / -78.4,117.9 | 48.1% (t) chi angles: 179.7 | 0.078Å | - | - |
14 | HIS | 92.42 | - | Favored (75.5%) General case / -69.7,-34.0 | 75.6% (m80) chi angles: 296.2,93.9 | 0.052Å | - | - |
15 | GLU | 132.29 | - | Favored (90.39%) General case / -65.4,-37.9 | 38.8% (tp10) chi angles: 180.2,67.4,178.6 | 0.074Å | - | - |
16 | TYR | 143.76 | - | Favored (21.67%) General case / -78.3,117.8 | 21.3% (t80) chi angles: 196.8,64.5 | 0.053Å | - | - |
17 | LYS | 265.36 | 0.422Å C with 17 LYS CD | Favored (6.79%) General case / -108.4,96.0 | 0.5% chi angles: 188.4,293.6,187.8,68.7 | 0.055Å | - | - |
18 | GLY | 80.09 | - | Favored (21.35%) Glycine / 136.4,-167.1 | - | - | - | - |
19 | ARG | 132.75 | 0.496Å CD with 21 ILE CD1 | Favored (44.6%) General case / -73.3,131.8 | 63.6% (ttt180) chi angles: 170.6,182.4,169.1,170.6 | 0.082Å | - | - |
20 | CYS | 144.44 | 0.408Å CB with 48 PHE O | Favored (12.56%) General case / -82.2,104.7 | 38.2% (t) chi angles: 187.8 | 0.099Å | - | - |
21 | ILE | 145.2 | 0.496Å CD1 with 19 ARG CD | Favored (58.02%) General case / -74.0,-45.2 | 43.9% (mm) chi angles: 301.3,304.9 | 0.045Å | - | - |
22 | GLN | 137.47 | 0.437Å C with 42 CYS SG | Favored (35.36%) General case / -137.8,164.7 | 39.8% (tp60) chi angles: 186.2,84.8,50 | 0.106Å | - | - |
23 | ASP | 58.06 | 0.418Å N with 22 GLN CG | Favored (92.95%) General case / -65.3,-38.6 | 86% (m-20) chi angles: 292.4,151 | 0.085Å | - | - |
24 | MET | 109.8 | - | Favored (92.08%) General case / -59.5,-43.2 | 13.7% (mmt) chi angles: 281.8,290.9,192.4 | 0.09Å | - | - |
25 | ASP | 52.68 | - | Favored (98.97%) General case / -62.1,-43.1 | 81.5% (m-20) chi angles: 290.3,174.8 | 0.089Å | - | - |
26 | CYS | 71.75 | - | Favored (93.56%) General case / -64.6,-44.0 | 26.6% (t) chi angles: 172.3 | 0.047Å | - | - |
27 | ASN | 72.25 | - | Favored (92.26%) General case / -59.6,-44.1 | 6.5% (m120) chi angles: 280,74.8 | 0.096Å | - | - |
28 | ALA | 61.87 | 0.457Å O with 33 GLU CB | Favored (75.62%) General case / -60.2,-50.6 | - | 0.093Å | - | - |
29 | ALA | 65.17 | 0.554Å CA with 33 GLU CB | Favored (82.33%) General case / -57.1,-44.1 | - | 0.079Å | - | - |
30 | CYS | 75.4 | - | Favored (14.27%) General case / -70.5,-55.1 | 22.5% (m) chi angles: 311.5 | 0.144Å | - | - |
31 | VAL | 99.42 | 0.412Å CG2 with 38 THR O | Allowed (0.87%) General case / -62.7,-66.7 | 80.2% (t) chi angles: 179.1 | 0.071Å | - | - |
32 | LYS | 148.12 | - | Allowed (1.84%) General case / -140.8,7.0 | 19.4% (ptmt) chi angles: 61,171.6,302.5,174.7 | 0.128Å | - | - |
33 | GLU | 218.22 | 0.554Å CB with 29 ALA CA | Favored (91.98%) General case / -66.4,-41.1 | 5.1% (tp10) chi angles: 181.2,87.7,60 | 0.225Å | - | - |
34 | SER | 182.06 | - | OUTLIER (0.04%) General case / -158.4,-91.5 | 63.6% (m) chi angles: 298.8 | 0.124Å | - | - |
35 | GLU | 121.44 | 0.407Å CB with 37 TYR CE1 | Favored (3.09%) General case / -53.8,156.4 | 68.9% (mm-40) chi angles: 293.1,296.9,169.8 | 0.057Å | - | - |
36 | SER | 105.89 | - | Favored (9.59%) General case / -85.4,95.1 | 68.8% (m) chi angles: 297 | 0.091Å | - | - |
37 | TYR | 175.01 | 0.546Å CZ with 55 LYS CE | Favored (47.03%) General case / -136.2,143.5 | 75.8% (m-85) chi angles: 287.7,85.3 | 0.164Å | - | - |
38 | THR | 132.7 | 0.458Å CG2 with 39 GLY N | Favored (71.14%) General case / -70.8,-44.6 | 9% (t) chi angles: 180 | 0.052Å | - | - |
39 | GLY | 59.23 | 0.458Å N with 38 THR CG2 | Favored (19.71%) Glycine / -157.0,-168.8 | - | - | - | - |
40 | GLY | 52.28 | - | Favored (16.18%) Glycine / -174.2,155.5 | - | - | - | - |
41 | PHE | 171.52 | - | Favored (52.53%) General case / -137.0,156.1 | 55.8% (m-85) chi angles: 283.3,83.2 | 0.133Å | - | - |
42 | CYS | 136.32 | 0.437Å SG with 22 GLN C | Favored (43.37%) General case / -74.8,139.2 | 66.5% (m) chi angles: 302.2 | 0.189Å | - | - |
43 | ASN | 118.34 | 0.471Å CB with 46 PRO CB | Favored (39.44%) General case / -59.7,130.1 | 9.7% (m120) chi angles: 286.9,151.1 | 0.083Å | - | - |
44 | GLY | 82.33 | 0.417Å CA with 48 PHE CE1 | Allowed (1.57%) Glycine / -80.5,-66.5 | - | - | - | - |
45 | ARG | 61.13 | 0.432Å CB with 46 PRO CD | Favored (41.61%) Pre-proline / -58.9,-38.2 | 72.9% (mtt180) chi angles: 292.4,190.4,178.3,209.9 | 0.068Å | - | - |
46 | PRO | 221.33 | 0.471Å CB with 43 ASN CB | Favored (8.59%) Proline / -69.3,178.3 | 92.8% (Cg_exo) chi angles: 329.9 | 0.14Å | - | - |
47 | PRO | 122.41 | - | Favored (8.73%) Proline / -63.7,-2.4 | 87.4% (Cg_exo) chi angles: 331.6 | 0.133Å | - | - |
48 | PHE | 106.09 | 0.417Å CE1 with 44 GLY CA | Favored (2.69%) General case / 74.2,3.8 | 98.9% (m-85) chi angles: 295.9,97.4 | 0.135Å | - | - |
49 | LYS | 128.65 | - | Favored (67.17%) General case / -74.0,-39.7 | 92.2% (mttt) chi angles: 283.9,171,176.9,181.1 | 0.113Å | - | - |
50 | GLN | 75.25 | - | Favored (38.87%) General case / -83.6,129.2 | 95.4% (mt-30) chi angles: 293.2,180,345 | 0.082Å | - | - |
51 | CYS | 87.34 | - | Favored (23.25%) General case / -92.5,108.3 | 2.6% (t) chi angles: 162.2 | 0.072Å | - | - |
52 | PHE | 96.79 | - | Favored (35.46%) General case / -97.1,115.5 | 0.2% chi angles: 234.3,80.6 | 0.108Å | - | - |
53 | CYS | 62.77 | 0.528Å CB with 37 TYR CD2 | Favored (21.19%) General case / -98.2,150.9 | 85.7% (m) chi angles: 300.5 | 0.103Å | - | - |
54 | THR | 54.66 | 0.553Å CB with 8 ILE CG2 | Favored (59.16%) General case / -119.2,135.7 | 81.3% (p) chi angles: 61.1 | 0.076Å | - | - |
55 | LYS | 104.68 | 0.546Å CE with 37 TYR CZ | Favored (54.67%) Pre-proline / -123.1,158.0 | 94.5% (mttt) chi angles: 290.2,170.1,179.2,177.3 | 0.209Å | - | - |
56 | PRO | 93.21 | - | Favored (17.42%) Proline / -72.5,131.0 | 8.4% (Cg_endo) chi angles: 10.4 | 0.095Å | - | - |
57 | CYS | 74.03 | 0.438Å SG with 9 CYS N | Favored (41.21%) General case / -80.5,129.9 | 91.7% (m) chi angles: 289.9 | 0.086Å | - | - |
58 | LYS | 251.63 | - | Favored (45.96%) General case / -69.2,133.3 | 12.4% (mmmm) chi angles: 295.9,304.6,314.9,295.8 | 0.099Å | - | - |
59 | ARG | 216.56 | - | Favored (23.64%) General case / -80.1,164.0 | 96.8% (mtt180) chi angles: 296.4,180.4,180.2,193.9 | 0.033Å | - | - |
60 | GLU | 239.23 | - | Favored (28.16%) General case / -55.9,141.9 | 89.2% (tt0) chi angles: 179.9,180.2,178.2 | 0.088Å | - | - |
61 | ARG | 116.24 | - | Favored (93.7%) General case / -62.0,-39.6 | 44.8% (ttt180) chi angles: 189.9,186.9,191.4,213.4 | 0.107Å | - | - |
62 | ALA | 206.57 | - | Favored (14.89%) General case / -58.9,123.1 | - | 0.092Å | - | - |
63 | ALA | 235.68 | - | Favored (10.78%) General case / -101.5,167.5 | - | 0.107Å | - | - |
64 | ALA | 238.32 | - | Favored (53.19%) General case / -60.6,139.5 | - | 0.101Å | - | - |
65 | THR | 198.46 | - | Favored (38.54%) General case / -74.5,150.5 | 87.1% (m) chi angles: 301.8 | 0.073Å | - | - |
66 | LEU | 251.75 | 0.449Å N with 66 LEU CD2 | Favored (60.93%) General case / -112.2,132.1 | 1.8% (mm?) chi angles: 294.4,294 | 0.098Å | - | - |
67 | ARG | 317.15 | - | Favored (56.24%) General case / -128.4,140.9 | 58% (ttm-85) chi angles: 183.7,185,301.8,269.7 | 0.125Å | - | - |
68 | TRP | 186.6 | - | Favored (22.03%) Pre-proline / -107.3,133.3 | 89.6% (m95) chi angles: 290.5,87.7 | 0.09Å | - | - |
69 | PRO | 164.49 | - | Favored (47.53%) Proline / -75.5,158.3 | 71.6% (Cg_exo) chi angles: 332.5 | 0.096Å | - | - |
70 | GLY | 92.42 | - | Favored (13.4%) Glycine / -143.4,144.9 | - | - | - | - |
71 | LEU | 111.02 | - | - | 62% (tp) chi angles: 180.5,63.3 | 0.093Å | - | - |